Weedy and invasive plant genomics /
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作 者：edited by C. Neal Stewart, Jr.
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ISBN：9780813822884
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简介
Summary:
Publisher Summary 1
Weedy and Invasive Plant Genomicsoffers a comprehensive, up-to-date reference on genetic and genomics research in weedy and invasive plants. Forward-looking in its approach, the work also assesses the areas of future research necessary to defeat these agricultural pests. This research-based, scholarly work engenders a further understanding of weeds and invasive plants, opening avenues for developing more effective methods of managing them. This volume will be a necessary reference for weed scientists, agrochemical industry researchers, conservation geneticist, and plant biologists.
目录
Contributors p. xi
Preface p. xv
Chapter 1 Why Should Weed Scientists Care About Genomics? William K. Vencill p. 3
Genomics To A Weed Scientist p. 3
Resistance p. 4
Better Use Of Existing Herbicides p. 8
Chapter 2 An Introduction To Molecular Genetic And Genomic Techniques Chhandak Basu and Sam R. Zwenger p. 11
Weeds As A Source Of Genes For Crop Improvement p. 11
Tools And Approaches For Understanding Weediness At The Molecular Level p. 12
Chapter 3 Arabidopis Is Not A Weed, And Mostly Not A Good Model For Weed Genomics; There Is No Good Model For Weed Genomics Jonathan Gressel p. 25
Introduction: Arabidopis And Weediness p. 25
Questions About Weeds-Can Arabidopis Genomics Answer Them? p. 27
The Misdirected Approach In Using Arabidopis To Elucidate New Herbicide Targets p. 28
Arabidopis Genomics Can Help In Dealing With Transgene Flow-In A Limited Manner p. 29
Lessons To Be Learned p. 30
Chapter 4 Model Weeds For Genomics Research Wun S. Chao and David P. Horvath p. 33
What Makes A Good Model Species? p. 34
Leveraging From Other Models p. 36
Genomics Tolls For Weeds That Are Under Development p. 44
Chapter 5 21st-Century Weed Science: A Call For Amaranthus Genomics Patrick J. Tranel and Federico Trucco p. 53
The Amaranthus Genus p. 53
Hybridization And Adaptive Evolution p. 61
Herbicide Resistance p. 64
Currently Available Genomic resources p. 71
Needs And Oppurtunities p. 75
Chapter 6 Evolutionary Genomics Of Weedy Rice Briana L. Gross and Kenneth M. Olsen p. 83
Phenotypic Diversity Of Weedy Rice p. 84
Genomic Diversity Of Weedy Rice p. 85
The Origin(s) And Evolution Of Weedy Rice p. 89
The Genetic Basis Of Weediness And Use Of Weedy Rice In Crop Breeding p. 94
Chapter 7 Rhizomatousness: Genes Important For A Weediness Syndrome Andrew H. Paterson p. 99
Developmental Context p. 100
An Exemplary Case: Johnsongrass p. 101
Dissecting The Genetic Control Of Rhizomatousness p. 103
Early Insights Into The Sorghum Rhizo-Transcriptome p. 105
Future Work And Potential Applications p. 107
Synthesis p. 109
Chapter 8 Leafy Spurge: An Emerging Model To Stdy Traits Of Perennial Weeds David P. Horvath and James V. Anderson p. 113
Regulation Of Shoot Development And Growth p. 113
Regulation Of Bud Dormancy p. 116
Case Study: Leafy Spurge p. 117
Future Work p. 122
Chapter 9 Herbicide Resistance: Target Site Mutations Christopher Preston p. 127
Resistance To Photosystem II-Inhibiting Herbicides p. 128
Resistance To Acetohydroxyacid Synthase-Inhibiting Herbicides p. 131
Resistance To Acetyl Coenzyme A Carboxylase-Inhibiting Herbicides p. 136
Resistance To Glyphosate p. 138
Resistance To Microtubule Assembly Inhibitors p. 140
Resistance To Phytoene Desaturase Inhibitors p. 141
Chapter 10 Molecular and Genomic Mechanisms Of Non-Target-Site Herbicide Resistance Jun Hu and Patrick J. Tranel and C. Neal Stewart Jr. and Joshua S. Yuan p. 149
Herbicide Application And Resistance p. 149
Herbicide Classification And Resistance p. 150
Non-Target Herbicide Resistance p. 150
Signal Tansduction p. 150
Detoxification and Modification p. 151
Chapter 11 A Herbicide Defense Trait That Is Distinct From Resistance: The Evolutionary Ecology And Genomics Of Herbicide Tolerance Regina S.Baucom p. 163
Resistance Versus Tolerance In Weed Science p. 163
Tolerance In Evolutionary Ecology p. 166
Tolerance Traits And The Genomics Of Tolerance p. 171
Why Again Should We Focus On Tolerance, Tolerance Traits, And The Genomics Of Tolerance? p. 172
Chapter 12 The Genomics of Plant Invasion: A Case Study In Spotted Knapweed Amanda K. Broz and Jorge M. Vivanco p. 177
Why Study Invasive Plant Genomics? p. 177
Spotted Knapweed Life History p. 178
Allelopathy And The Novel Weapons Hypothesis p. 180
Genomics Resources And Approaches For Studying Spotted Knapweed p. 185
Chapter 13 Molecular Ecology Of Plant Competition Dominik D. Schmidt and Merijn R. Kant and Ian T. Baldwin p. 197
Competition Signals And Their Perception By Plants p. 198
Molecular Basis Of Competitively Important Traits p. 207
Transcriptomic Insights Into Competitively Interactions Of Weedy Plants p. 211
Chapter 14 Genomics And Weeds: A Synthesis Stephen O. Duke and Scott R. Baerson and Jonathan Gressel p. 221
From Fundamental Information To Practical Solutions p. 222
Where Do We Go From Here? p. 241
Index p. 249
Preface p. xv
Chapter 1 Why Should Weed Scientists Care About Genomics? William K. Vencill p. 3
Genomics To A Weed Scientist p. 3
Resistance p. 4
Better Use Of Existing Herbicides p. 8
Chapter 2 An Introduction To Molecular Genetic And Genomic Techniques Chhandak Basu and Sam R. Zwenger p. 11
Weeds As A Source Of Genes For Crop Improvement p. 11
Tools And Approaches For Understanding Weediness At The Molecular Level p. 12
Chapter 3 Arabidopis Is Not A Weed, And Mostly Not A Good Model For Weed Genomics; There Is No Good Model For Weed Genomics Jonathan Gressel p. 25
Introduction: Arabidopis And Weediness p. 25
Questions About Weeds-Can Arabidopis Genomics Answer Them? p. 27
The Misdirected Approach In Using Arabidopis To Elucidate New Herbicide Targets p. 28
Arabidopis Genomics Can Help In Dealing With Transgene Flow-In A Limited Manner p. 29
Lessons To Be Learned p. 30
Chapter 4 Model Weeds For Genomics Research Wun S. Chao and David P. Horvath p. 33
What Makes A Good Model Species? p. 34
Leveraging From Other Models p. 36
Genomics Tolls For Weeds That Are Under Development p. 44
Chapter 5 21st-Century Weed Science: A Call For Amaranthus Genomics Patrick J. Tranel and Federico Trucco p. 53
The Amaranthus Genus p. 53
Hybridization And Adaptive Evolution p. 61
Herbicide Resistance p. 64
Currently Available Genomic resources p. 71
Needs And Oppurtunities p. 75
Chapter 6 Evolutionary Genomics Of Weedy Rice Briana L. Gross and Kenneth M. Olsen p. 83
Phenotypic Diversity Of Weedy Rice p. 84
Genomic Diversity Of Weedy Rice p. 85
The Origin(s) And Evolution Of Weedy Rice p. 89
The Genetic Basis Of Weediness And Use Of Weedy Rice In Crop Breeding p. 94
Chapter 7 Rhizomatousness: Genes Important For A Weediness Syndrome Andrew H. Paterson p. 99
Developmental Context p. 100
An Exemplary Case: Johnsongrass p. 101
Dissecting The Genetic Control Of Rhizomatousness p. 103
Early Insights Into The Sorghum Rhizo-Transcriptome p. 105
Future Work And Potential Applications p. 107
Synthesis p. 109
Chapter 8 Leafy Spurge: An Emerging Model To Stdy Traits Of Perennial Weeds David P. Horvath and James V. Anderson p. 113
Regulation Of Shoot Development And Growth p. 113
Regulation Of Bud Dormancy p. 116
Case Study: Leafy Spurge p. 117
Future Work p. 122
Chapter 9 Herbicide Resistance: Target Site Mutations Christopher Preston p. 127
Resistance To Photosystem II-Inhibiting Herbicides p. 128
Resistance To Acetohydroxyacid Synthase-Inhibiting Herbicides p. 131
Resistance To Acetyl Coenzyme A Carboxylase-Inhibiting Herbicides p. 136
Resistance To Glyphosate p. 138
Resistance To Microtubule Assembly Inhibitors p. 140
Resistance To Phytoene Desaturase Inhibitors p. 141
Chapter 10 Molecular and Genomic Mechanisms Of Non-Target-Site Herbicide Resistance Jun Hu and Patrick J. Tranel and C. Neal Stewart Jr. and Joshua S. Yuan p. 149
Herbicide Application And Resistance p. 149
Herbicide Classification And Resistance p. 150
Non-Target Herbicide Resistance p. 150
Signal Tansduction p. 150
Detoxification and Modification p. 151
Chapter 11 A Herbicide Defense Trait That Is Distinct From Resistance: The Evolutionary Ecology And Genomics Of Herbicide Tolerance Regina S.Baucom p. 163
Resistance Versus Tolerance In Weed Science p. 163
Tolerance In Evolutionary Ecology p. 166
Tolerance Traits And The Genomics Of Tolerance p. 171
Why Again Should We Focus On Tolerance, Tolerance Traits, And The Genomics Of Tolerance? p. 172
Chapter 12 The Genomics of Plant Invasion: A Case Study In Spotted Knapweed Amanda K. Broz and Jorge M. Vivanco p. 177
Why Study Invasive Plant Genomics? p. 177
Spotted Knapweed Life History p. 178
Allelopathy And The Novel Weapons Hypothesis p. 180
Genomics Resources And Approaches For Studying Spotted Knapweed p. 185
Chapter 13 Molecular Ecology Of Plant Competition Dominik D. Schmidt and Merijn R. Kant and Ian T. Baldwin p. 197
Competition Signals And Their Perception By Plants p. 198
Molecular Basis Of Competitively Important Traits p. 207
Transcriptomic Insights Into Competitively Interactions Of Weedy Plants p. 211
Chapter 14 Genomics And Weeds: A Synthesis Stephen O. Duke and Scott R. Baerson and Jonathan Gressel p. 221
From Fundamental Information To Practical Solutions p. 222
Where Do We Go From Here? p. 241
Index p. 249
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